Index

A

AbstractNodeDataObject (class in opencmiss.utils.zinc.general) addFieldTypeToDict() (opencmiss.argon.argonregion.ArgonRegion method) addModelSource() (opencmiss.argon.argonregion.ArgonRegion method) addToZincStreaminformationRegion() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) addViewByType() (opencmiss.argon.argonviews.ArgonViewManager method) applyModelSource() (opencmiss.argon.argonregion.ArgonRegion method) applyParameters() (opencmiss.argon.argonsceneviewer.ArgonSceneviewer method) ArgonDocument (class in opencmiss.argon.argondocument) ArgonError (class in opencmiss.argon.argonerror) ArgonLogger (class in opencmiss.argon.argonlogger) ArgonMaterials (class in opencmiss.argon.argonmaterials) ArgonModelSourceFile (class in opencmiss.argon.argonmodelsources)

ArgonRegion (class in opencmiss.argon.argonregion) ArgonSceneExporter (class in opencmiss.exporter.thumbnail) (class in opencmiss.exporter.webgl) ArgonSceneviewer (class in opencmiss.argon.argonsceneviewer) ArgonSpectrums (class in opencmiss.argon.argonspectrums) ArgonTessellations (class in opencmiss.argon.argontessellations) ArgonView (class in opencmiss.argon.argonviews) ArgonViewManager (class in opencmiss.argon.argonviews) assign_field_parameters() (in module opencmiss.utils.zinc.field) assignFieldParameters() (in module opencmiss.utils.zinc.field) axis_angle_to_quaternion() (in module opencmiss.maths.vectorops) axis_angle_to_rotation_matrix() (in module opencmiss.maths.vectorops)

B

BaseExporter (class in opencmiss.exporter.base)

C

calculateExtents() (in module opencmiss.maths.algorithms) ChangeManager (class in opencmiss.utils.zinc.general) checkVersion() (opencmiss.argon.argondocument.ArgonDocument method) clear() (opencmiss.argon.argonregion.ArgonRegion method) closeLogger() (opencmiss.argon.argonlogger.ArgonLogger static method) connectRegionChange() (opencmiss.argon.argonregion.ArgonRegion method) create_cube_element() (in module opencmiss.utils.zinc.finiteelement) create_field_coordinates() (in module opencmiss.utils.zinc.field) create_field_euler_angles_rotation_matrix() (in module opencmiss.utils.zinc.field) create_field_fibres() (in module opencmiss.utils.zinc.field) create_field_finite_element_clone() (in module opencmiss.utils.zinc.field) create_field_group() (in module opencmiss.utils.zinc.field) create_field_image() (in module opencmiss.utils.zinc.field) create_field_iso_scalar_for_plane() (in module opencmiss.utils.zinc.field) create_field_mesh_integral() (in module opencmiss.utils.zinc.field) create_field_plane_visibility() (in module opencmiss.utils.zinc.field) create_field_stored_mesh_location() (in module opencmiss.utils.zinc.field) create_field_stored_string() (in module opencmiss.utils.zinc.field) create_field_texture_coordinates() (in module opencmiss.utils.zinc.field) create_field_visibility_for_plane() (in module opencmiss.utils.zinc.field) create_field_volume_image() (in module opencmiss.utils.zinc.field) create_fields_displacement_gradients() (in module opencmiss.utils.zinc.field) create_fields_transformations() (in module opencmiss.utils.zinc.field) create_material_using_image_field() (in module opencmiss.utils.zinc.material) create_node() (in module opencmiss.utils.zinc.general)

create_nodes() (in module opencmiss.utils.zinc.finiteelement) create_square_element() (in module opencmiss.utils.zinc.finiteelement) create_triangle_elements() (in module opencmiss.utils.zinc.finiteelement) createChild() (opencmiss.argon.argonregion.ArgonRegion method) createCubeElement() (in module opencmiss.utils.zinc.finiteelement) createFieldCoordinates() (in module opencmiss.utils.zinc.field) createFieldEulerAnglesRotationMatrix() (in module opencmiss.utils.zinc.field) createFieldFibres() (in module opencmiss.utils.zinc.field) createFieldFiniteElementClone() (in module opencmiss.utils.zinc.field) createFieldGroup() (in module opencmiss.utils.zinc.field) createFieldImage() (in module opencmiss.utils.zinc.field) createFieldIsoScalarForPlane() (in module opencmiss.utils.zinc.field) createFieldMeshIntegral() (in module opencmiss.utils.zinc.field) createFieldPlaneVisibility() (in module opencmiss.utils.zinc.field) createFieldsDisplacementGradients() (in module opencmiss.utils.zinc.field) createFieldStoredMeshLocation() (in module opencmiss.utils.zinc.field) createFieldStoredString() (in module opencmiss.utils.zinc.field) createFieldsTransformations() (in module opencmiss.utils.zinc.field) createFieldTextureCoordinates() (in module opencmiss.utils.zinc.field) createFieldVisibilityForPlane() (in module opencmiss.utils.zinc.field) createFieldVolumeImage() (in module opencmiss.utils.zinc.field) createMaterialUsingImageField() (in module opencmiss.utils.zinc.material) createNode() (in module opencmiss.utils.zinc.general) createNodes() (in module opencmiss.utils.zinc.finiteelement) createSquareElement() (in module opencmiss.utils.zinc.finiteelement) createTriangleElements() (in module opencmiss.utils.zinc.finiteelement)

D

define_standard_graphics_objects() (in module opencmiss.utils.zinc.general) defineStandardGraphicsObjects() (in module opencmiss.utils.zinc.general) deserialize() (opencmiss.argon.argondocument.ArgonDocument method) (opencmiss.argon.argonmaterials.ArgonMaterials method) (opencmiss.argon.argonregion.ArgonRegion method) (opencmiss.argon.argonsceneviewer.ArgonSceneviewer method) (opencmiss.argon.argonspectrums.ArgonSpectrums method) (opencmiss.argon.argontessellations.ArgonTessellations method) (opencmiss.argon.argonviews.ArgonView method) (opencmiss.argon.argonviews.ArgonViewManager method)

E

euler_to_rotation_matrix() (in module opencmiss.maths.vectorops) evaluate_field_nodeset_mean() (in module opencmiss.utils.zinc.finiteelement) evaluate_field_nodeset_range() (in module opencmiss.utils.zinc.finiteelement) evaluateFieldNodesetMean() (in module opencmiss.utils.zinc.finiteelement) evaluateFieldNodesetRange() (in module opencmiss.utils.zinc.finiteelement)

export() (opencmiss.exporter.thumbnail.ArgonSceneExporter method) (opencmiss.exporter.webgl.ArgonSceneExporter method) export_thumbnail() (opencmiss.exporter.thumbnail.ArgonSceneExporter method) export_view() (opencmiss.exporter.webgl.ArgonSceneExporter method) export_webgl() (opencmiss.exporter.webgl.ArgonSceneExporter method) extractImageCorners() (in module opencmiss.utils.image)

F

field_exists() (in module opencmiss.utils.zinc.field) field_is_managed_coordinates() (in module opencmiss.utils.zinc.field) field_is_managed_group() (in module opencmiss.utils.zinc.field) fieldExists() (in module opencmiss.utils.zinc.field) fieldIsManagedCoordinates() (in module opencmiss.utils.zinc.field) fieldIsManagedGroup() (in module opencmiss.utils.zinc.field) find_node_with_name() (in module opencmiss.utils.zinc.finiteelement) find_or_create_field_coordinates() (in module opencmiss.utils.zinc.field) find_or_create_field_fibres() (in module opencmiss.utils.zinc.field) find_or_create_field_finite_element() (in module opencmiss.utils.zinc.field) find_or_create_field_group() (in module opencmiss.utils.zinc.field) find_or_create_field_node_group() (in module opencmiss.utils.zinc.field) find_or_create_field_stored_mesh_location() (in module opencmiss.utils.zinc.field) find_or_create_field_stored_string() (in module opencmiss.utils.zinc.field)

find_or_create_field_texture_coordinates() (in module opencmiss.utils.zinc.field) findNodeWithName() (in module opencmiss.utils.zinc.finiteelement) findOrCreateFieldCoordinates() (in module opencmiss.utils.zinc.field) findOrCreateFieldFibres() (in module opencmiss.utils.zinc.field) findOrCreateFieldFiniteElement() (in module opencmiss.utils.zinc.field) findOrCreateFieldGroup() (in module opencmiss.utils.zinc.field) findOrCreateFieldNodeGroup() (in module opencmiss.utils.zinc.field) findOrCreateFieldStoredMeshLocation() (in module opencmiss.utils.zinc.field) findOrCreateFieldStoredString() (in module opencmiss.utils.zinc.field) findOrCreateFieldTextureCoordinates() (in module opencmiss.utils.zinc.field) findOrCreateSpectrumGlyphColourBar() (opencmiss.argon.argonspectrums.ArgonSpectrums method) findRegion() (opencmiss.argon.argondocument.ArgonDocument method) freeContents() (opencmiss.argon.argonregion.ArgonRegion method) freeVisualisationContents() (opencmiss.argon.argondocument.ArgonDocument method)

G

get_element_node_identifiers() (in module opencmiss.utils.zinc.finiteelement) get_element_node_identifiers_basis_order() (in module opencmiss.utils.zinc.finiteelement) get_group_list() (in module opencmiss.utils.zinc.field) get_managed_field_names() (in module opencmiss.utils.zinc.field) get_maximum_element_identifier() (in module opencmiss.utils.zinc.finiteelement) get_maximum_node_identifier() (in module opencmiss.utils.zinc.finiteelement) get_node_name_centres() (in module opencmiss.utils.zinc.finiteelement) get_unique_field_name() (in module opencmiss.utils.zinc.field) get_view_parameters() (opencmiss.argon.argonsceneviewer.ArgonSceneviewer method) getActiveSceneviewer() (opencmiss.zincwidgets.viewwidget.ViewWidget method) getActiveView() (opencmiss.argon.argonviews.ArgonViewManager method) getChild() (opencmiss.argon.argonregion.ArgonRegion method) getChildCount() (opencmiss.argon.argonregion.ArgonRegion method) getDisplayName() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) (opencmiss.argon.argonregion.ArgonRegion method) getElementNodeIdentifiers() (in module opencmiss.utils.zinc.finiteelement) getElementNodeIdentifiersBasisOrder() (in module opencmiss.utils.zinc.finiteelement) getFieldTypeDict() (opencmiss.argon.argonregion.ArgonRegion method) getFileName() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) getGridSpecification() (opencmiss.argon.argonviews.ArgonView method) getGroupList() (in module opencmiss.utils.zinc.field) getLogger() (opencmiss.argon.argonlogger.ArgonLogger static method) getManagedFieldNames() (in module opencmiss.utils.zinc.field) getMaterials() (opencmiss.argon.argondocument.ArgonDocument method) getMaximumElementIdentifier() (in module opencmiss.utils.zinc.finiteelement) getMaximumNodeIdentifier() (in module opencmiss.utils.zinc.finiteelement)

getMessage() (opencmiss.argon.argonerror.ArgonError method) getModelSources() (opencmiss.argon.argonregion.ArgonRegion method) getName() (opencmiss.argon.argondocument.ArgonDocument method) (opencmiss.argon.argonregion.ArgonRegion method) (opencmiss.argon.argonviews.ArgonView method) getNodeNameCentres() (in module opencmiss.utils.zinc.finiteelement) getParent() (opencmiss.argon.argonregion.ArgonRegion method) getPath() (opencmiss.argon.argonregion.ArgonRegion method) getRegionName() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) getRootRegion() (opencmiss.argon.argondocument.ArgonDocument method) getScenes() (opencmiss.argon.argonviews.ArgonView method) getSceneviewer() (opencmiss.zincwidgets.viewwidget.ViewWidget method) getSpectrums() (opencmiss.argon.argondocument.ArgonDocument method) getTessellations() (opencmiss.argon.argondocument.ArgonDocument method) getTime() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) getType() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) getUniqueFieldName() (in module opencmiss.utils.zinc.field) getView() (opencmiss.argon.argonviews.ArgonViewManager method) getViewManager() (opencmiss.argon.argondocument.ArgonDocument method) getViews() (opencmiss.argon.argonviews.ArgonViewManager method) getZincContext() (opencmiss.argon.argondocument.ArgonDocument method) (opencmiss.argon.argonmaterials.ArgonMaterials method) (opencmiss.argon.argonspectrums.ArgonSpectrums method) (opencmiss.argon.argontessellations.ArgonTessellations method) (opencmiss.argon.argonviews.ArgonView method) (opencmiss.argon.argonviews.ArgonViewManager method) getZincRegion() (opencmiss.argon.argonregion.ArgonRegion method)

H

HierarchicalChangeManager (class in opencmiss.utils.zinc.general)

I

initialiseVisualisationContents() (opencmiss.argon.argondocument.ArgonDocument method)

isEdit() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) isLoaded() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method)

L

load() (opencmiss.exporter.base.BaseExporter method)

loggerCallback() (opencmiss.argon.argonlogger.ArgonLogger static method)

M

matrix_constant_mult() (in module opencmiss.maths.vectorops) matrix_mult() (in module opencmiss.maths.vectorops) matrix_vector_mult() (in module opencmiss.maths.vectorops) module opencmiss.exporter.base opencmiss.exporter.thumbnail opencmiss.exporter.webgl opencmiss.maths.algorithms opencmiss.maths.vectorops opencmiss.utils.geometry.plane opencmiss.utils.image opencmiss.utils.zinc.field opencmiss.utils.zinc.finiteelement opencmiss.utils.zinc.general opencmiss.utils.zinc.material

O

opencmiss.exporter.base module opencmiss.exporter.thumbnail module opencmiss.exporter.webgl module opencmiss.maths.algorithms module opencmiss.maths.vectorops module opencmiss.utils.geometry.plane module

opencmiss.utils.image module opencmiss.utils.zinc.field module opencmiss.utils.zinc.finiteelement module opencmiss.utils.zinc.general module opencmiss.utils.zinc.material module orphan_field_by_name() (in module opencmiss.utils.zinc.field) orphanFieldByName() (in module opencmiss.utils.zinc.field)

P

PlaneAttitude (class in opencmiss.utils.geometry.plane)

Q

quaternion_to_rotation_matrix() (in module opencmiss.maths.vectorops)

R

remove() (opencmiss.argon.argonregion.ArgonRegion method) removeChild() (opencmiss.argon.argonregion.ArgonRegion method) removeModelSource() (opencmiss.argon.argonregion.ArgonRegion method) removeSpectrumByName() (opencmiss.argon.argonspectrums.ArgonSpectrums method)

removeView() (opencmiss.argon.argonviews.ArgonViewManager method) renameSpectrum() (opencmiss.argon.argonspectrums.ArgonSpectrums method) replaceFieldTypeKey() (opencmiss.argon.argonregion.ArgonRegion method) rotation_matrix_to_euler() (in module opencmiss.maths.vectorops)

S

serialize() (opencmiss.argon.argondocument.ArgonDocument method) (opencmiss.argon.argonmaterials.ArgonMaterials method) (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) (opencmiss.argon.argonregion.ArgonRegion method) (opencmiss.argon.argonsceneviewer.ArgonSceneviewer method) (opencmiss.argon.argonspectrums.ArgonSpectrums method) (opencmiss.argon.argontessellations.ArgonTessellations method) (opencmiss.argon.argonviews.ArgonView method) (opencmiss.argon.argonviews.ArgonViewManager method) set_document() (opencmiss.exporter.base.BaseExporter method) set_filename() (opencmiss.exporter.base.BaseExporter method) set_parameters() (opencmiss.exporter.base.BaseExporter method)

setActiveView() (opencmiss.argon.argonviews.ArgonViewManager method) setCallback() (opencmiss.argon.argonlogger.ArgonLogger static method) setContext() (opencmiss.zincwidgets.viewwidget.ViewWidget method) setEdit() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) setFileName() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) setName() (opencmiss.argon.argonregion.ArgonRegion method) (opencmiss.argon.argonviews.ArgonView method) setRegionName() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) setTime() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) setViews() (opencmiss.argon.argonviews.ArgonViewManager method) setZincContext() (opencmiss.argon.argonlogger.ArgonLogger static method) (opencmiss.zincwidgets.timeeditorwidget.TimeEditorWidget method)

T

TimeEditorWidget (class in opencmiss.zincwidgets.timeeditorwidget)

transform_coordinates() (in module opencmiss.utils.zinc.finiteelement) transformCoordinates() (in module opencmiss.utils.zinc.finiteelement)

U

unloaded() (opencmiss.argon.argonmodelsources.ArgonModelSourceFile method) updateParameters() (opencmiss.argon.argonsceneviewer.ArgonSceneviewer method)

updateSceneviewer() (opencmiss.argon.argonviews.ArgonView method) updateSceneviewers() (opencmiss.argon.argonviews.ArgonViewManager method)

V

vector_matrix_mult() (in module opencmiss.maths.vectorops)

viewCount() (opencmiss.argon.argonviews.ArgonViewManager method) ViewWidget (class in opencmiss.zincwidgets.viewwidget)

W

writeErrorMessage() (opencmiss.argon.argonlogger.ArgonLogger static method)

writeInformationMessage() (opencmiss.argon.argonlogger.ArgonLogger static method) writeWarningMessage() (opencmiss.argon.argonlogger.ArgonLogger static method)

Z

ZincPlane (class in opencmiss.utils.geometry.plane)